Project-driven agent workflow

Shiro Neko treats a repository the way this project treats itself: progress tracked in TODO.md and ROADMAP.md, docs-driven development, spec-first plans, complete unit tests, and verify-before-done. When the repo keeps those files, the agent's system prompt carries a short workflow policy and the session tracks whether the workflow is being followed.

What the agent sees

When the session starts in a git repo that has any of:

TODO.md at the git root
ROADMAP.md at the git root
a docs/ directory (configurable with workflow.docsDir)

the system prompt gains a "Project workflow" block:

read TODO.md (the task list) before starting and keep it current as you go
keep ROADMAP.md current when a milestone ships
write a short plan first (spec-first) for anything non-trivial
add tests alongside code; the project expects complete unit tests
verify with the project's check commands (tests/typecheck/build) before declaring done

Bare repos (no TODO, ROADMAP, or docs) get no such block — the policy only renders when the project itself tracks progress, so a throwaway directory does not collect noise.

Auto-scaffolding

When you run shiro against an existing repo that has none of the tracking files (no TODO.md, no ROADMAP.md, no docs/, no AGENTS.md), the first turn bootstraps them automatically: the agent investigates the repo and writes project-specific TODO.md, ROADMAP.md, docs/README.md, and AGENTS.md before answering. A notice reports what was written:

scaffolded project workflow files: TODO.md, ROADMAP.md, docs/, AGENTS.md

Never overwrites. Any existing tracker (TODO.md, ROADMAP.md, docs/, or AGENTS.md) at the git root means the repo already tracks itself — nothing is created or touched.
Model-driven content. The files use real project content (commands, layout, conventions verified against the code) like /init does for AGENTS.md. If the model call fails, it degrades to the empty-template scaffold so the turn is never interrupted.
Write at the git root, not the cwd — matches where the policy looks.
Runs once per session, before the first real turn, so the policy and the first nudge already see the files.
The manual /init command still exists for when you want to write AGENTS.md (and scaffold the trackers) on demand.

TODO.md and ROADMAP.md are also loaded into the conversation like instruction files (Project tracker (...)), capped tighter than AGENTS.md so the agent sees the shape of the work without filling its context. This mirrors the existing AGENTS.md / CLAUDE.md / .shiro.md loading: outermost first, git root down to cwd.

The nudge

After a turn that wrote files (edit_file, write_file, apply_patch, ...) but never called todo_write, the session emits one soft notice:

reminder: you modified files without updating the project task list (TODO.md).
Keep it current: mark what you did.

Design constraints:

Once per session. Repeating a nag trains the model to ignore it.
Not a gate. The agent stays in control; this is guidance, not a block.
Only when the repo has a TODO/ROADMAP. A repo that tracks nothing gets no reminder.
Suppressed when the turn already called todo_write — the task list is current, nothing to say.

Configuration

workflow:
  enabled: true        # master switch; default true
  docsDir: docs        # where the project keeps developer docs; default 'docs'
  autoScaffold: true   # write TODO/ROADMAP/docs/AGENTS.md in a bare repo on first turn; default true

workflow.enabled: false disables both the prompt policy and the nudge. workflow.autoScaffold: false disables only the auto-bootstrap (the policy and nudge still engage when the repo already tracks progress).

/workflow

/workflow renders a panel with the project's tracking state and the session's behaviour:

row	meaning
`workflow`	on/off from config
`TODO.md`	present? line count
`ROADMAP.md`	present? line count
`docs dir`	present? file count (bounded at 200)
`reminders sent`	whether this session nudged (once, ever)

Relationship to AGENTS.md

AGENTS.md-style files are standing orders from the user and override the agent's defaults. The workflow policy is a default that documents what a repo tracking its own progress expects. When the two conflict, AGENTS.md wins — the workflow feature is a floor, not a ceiling.

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